Transcription Reprogramming and Genome Instability
Date:2025-01-08

NO. 55

 

CIMR Wednesday Lecture Series

 

Time:

Wednesday, Jan. 8 2025, 4:00 p.m.

 

Location:

Yifu Lecture Hall, North Basic Research Building 

 

Host

Chuan-Yuan Li (李川源)

Chinese Institutes for Medical Research, Beijing

 

Speaker

Lei Li (李磊)

Professor, Distinguished Investigator

Life Sciences Institute

Zhejiang University

 

TITLE:

Transcription Reprogramming and Genome Instability

 

ABSTRACT:

Impaired DNA crosslink repair leads to Fanconi anemia (FA), characterized by a unique manifestation of bone marrow failure and pancytopenia among diseases caused by DNA damage response defects. As a germline disorder, why the hematopoietic hierarchy is specifically affected is not fully understood. We find that reprogramming transcription during hematopoietic differentiation results in an overload of genotoxic stress, which causes aborted differentiation and depletion of FA mutant progenitor cells. DNA damage onset most likely arises from formaldehyde, an obligate by-product of oxidative protein demethylation during transcription regulation. Our results demonstrate that rapid and extensive transcription reprogramming associated with hematopoietic differentiation poses a major threat to genome stability and cell viability in the absence of the FA pathway. The connection between differentiation and DNA damage accumulation reveals a novel mechanism of genome scarring. Currently we are testing the idea of metabolic protection of differentiating FA mutant cells to alleviate their accumulation of DNA damage.

 

SELECTED PAPERS

1. Shen X, Wang R, Kim MJ, Hu Q, Hsu CC, Yao J, Klages-Mundt N, Tian Y, Lynn E, Brewer TF, Zhang Y, Arun B, Gan B, Andreeff M, Takeda S, Chen J, Park JI, Shi X, Chang CJ, Jung SY, Qin J, Li L. A Surge of DNA Damage Links Transcriptional Reprogramming and Hematopoietic Deficit in Fanconi Anemia. Mol Cell. 2020 Dec 17;80(6):1013-1024.e6.
 
2. Wang R, Lenoir WF, Wang C, Su D, McLaughlin M, Hu Q, Shen X, Tian Y, Klages-Mundt N, Lynn E, Wood RD, Chen J, Hart T, Li L. DNA polymerase ι compensates for Fanconi anemia pathway deficiency by countering DNA replication stress. Proc Natl Acad Sci U S A. 2020 Dec 29;117(52):33436-33445.
 
3. Hu Q, Klages-Mundt N, Wang R, Lynn E, Kuma Saha L, Zhang H, Srivastava M, Shen X, Tian Y, Kim H, Ye Y, Paull T, Takeda S, Chen J, Li L. The ARK Assay Is a Sensitive and Versatile Method for the Global Detection of DNA-Protein Crosslinks. Cell Rep. 2020 Jan 28;30(4):1235-1245.e4.